Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887397.1_cds_XP_016441768.1_37097
CDS Infomation

[gene=LOC107767311] [db_xref=GeneID:107767311] [protein=uncharacterized protein LOC107767311 isoform X5] [protein_id=XP_016441768.1] [location=join(43981..44100,44790..44996,45130..45311,45834..45960,46041..46205,47633..48271,48394..48483,48981..49066,49258..49309,53782..53865,55664..55707,56138..56156)] [gbkey=CDS]
Sequence

ATGGCAGCTTCTTGTTCCTGTACTGCTTCCCAGAAAGAGGTGGAAGACAAGCTCACAGCT
TATGGGATGAAGCTAATGAATCCTCCCTCTTCCATTGATGACCTCCGCAACTTTCTCCAT
AGAGTTGAATCCTTACTGAAAATGGTAGGTCAATGCCCTTCTGATTCAATGAAAAGTGCA
CTTCAACCTGTAATGAATGCACTAATCGAGAAAGAGCTTTTGAGGCATAACACCGAAGAT
GTCAAAGTTTTAGTTATTTGTTGTATTACTGAGCTTTTCAGAATAACTGCCCCACGTCAC
CCTTATGATGATGATAGACAAATGGAGGAAATTCTTCAGCGTACTGTAATGGCATTGAAA
AAGTTATCTGATGTTTCTGGCTGCATTTACTATAAGGTGGTCCAAATTCTTGAAATTGTT
GCTAAAGTAAGGGCCTTTGTGATGTTGTTGGACTTTGAATGTGACACCTTAGTTATTGAG
ATATTCAAACTTTTCCTCGGGATTATCAGGCCCTACCATCCTCATAATGTATTCACTAAG
ATGGAAGAAATCATGACTCAGCTCATAGAAGACAGTGATGAACTCTCAGTAGAGCTTCTA
CGGCCAATTCTTGATAGTGTCAAAAAGGAAAATCAGATTGCTTCACCTGTTTCATCAAAA
TTGGGGGAGAAAGTCCTGGAAAAGTGTGCTGCCATTGTTAAACCTTATCTTGCAGAAGCC
CTAAAGTCAATGAGTTTAAATCCTGATGACTGTGCTGAAATTGTTGCCTCAATATGCAAT
GAAACAAAAGGAGAACAAATGATGGCAAATGAAAATGCACCTGATACTCGACATCCTATA
AAAGTTGGTCAATCCGATTCAGAATTTTGTGAGCCAGCGCTGCAGGATGACACTCACATG
GAGCAGCTAAAGGTTACTTGTACAATGAATGTCATGAAACCTGTCAATCCAGAAGATGTG
CAACCAGCAACAAATGCCGAAGTAGTTTCAAGGAGGAGTAGTGAACTTACAGGTAGTGGT
GGCCAGCATTCTTCGGCGTCCAAAAAGCCTGAGATTAGCAATGGAAGTCATGGTCATTGG
GATCAGCCCAAAAAGAAAGAGATCCTGACAAATGAGGATGCTCACCTAGGTGTGTTAGTT
CCAGAAGGAGACGTGCTGCAATCCCAAGTTAAGAAAAAAGGTTCTCTTCATTTAGGTCTT
ACTGGGGAAGAGAGAACCAAGCACACAGTTTGTGCCAAAAGAAATCAAGGAAGGAGCTCA
AGGAAGAATGAGTTTGCTTCCAATTACGATGCAGATAGCAAATCTGAATTTAGCACCAAA
AGTGAAGAAGGAAACATCAGTGACTATGAGGAGCCATCACTGGAACTAATTGATGGAAGG
AAAAAGAAGAAAAAGAGAAATTCTTTTAAGATGCTTGATTTTGACGATTCTGGAGATGAG
GCAACTAAACTATCAGTCAGATATGAAAATAACTTAAACGGATGTGCTAATTATCAACCC
TGGAGGAAGTTGACCACAGGCAAACATGAGGATTCTAAATGGTGCCGTAACATCAAACGT
TATGGTGAAGAACTGGTTGGTGCTAGAATAAAAGTTTGGTGGCCATTGGATGAAAAGTTT
TACGAGGCAACCATTTCTTCTTTTGACCCTGTGAAATGGAGACACAAGGTCTTATATGAT
GATGGTGATATAGAAAACTTGATATTACATGAAGAGCGATGGGAGATGCTTGAAGACAAT
TCATCTCAAAAGGACAATGAAATAAACATTCAAGGCCATGCTGTTTCATCTGTTACATTT
GGGCAGGGAAAGTGA

Peptide Sequence

PEP ID

XP_016441768.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107767311 isoform X5 [Nicotiana tabacum]
Sequence

MAASCSCTASQKEVEDKLTAYGMKLMNPPSSIDDLRNFLHRVESLLKMVGQCPSDSMKSA
LQPVMNALIEKELLRHNTEDVKVLVICCITELFRITAPRHPYDDDRQMEEILQRTVMALK
KLSDVSGCIYYKVVQILEIVAKVRAFVMLLDFECDTLVIEIFKLFLGIIRPYHPHNVFTK
MEEIMTQLIEDSDELSVELLRPILDSVKKENQIASPVSSKLGEKVLEKCAAIVKPYLAEA
LKSMSLNPDDCAEIVASICNETKGEQMMANENAPDTRHPIKVGQSDSEFCEPALQDDTHM
EQLKVTCTMNVMKPVNPEDVQPATNAEVVSRRSSELTGSGGQHSSASKKPEISNGSHGHW
DQPKKKEILTNEDAHLGVLVPEGDVLQSQVKKKGSLHLGLTGEERTKHTVCAKRNQGRSS
RKNEFASNYDADSKSEFSTKSEEGNISDYEEPSLELIDGRKKKKKRNSFKMLDFDDSGDE
ATKLSVRYENNLNGCANYQPWRKLTTGKHEDSKWCRNIKRYGEELVGARIKVWWPLDEKF
YEATISSFDPVKWRHKVLYDDGDIENLILHEERWEMLEDNSSQKDNEINIQGHAVSSVTF
GQGK

Transcript Sequence

Gene sequence data has not been registered.